Javascript
Osteosarc.com
·25 words·1 min
An interactive portal for the openly shared genomics and imaging data from Sid Sijbrandij’s osteosarcoma tumor samples.
pubmed-pairs: Search PubMed for each pair of terms from two lists
·292 words·2 mins
A tool that searches PubMed for every pairwise combination of terms from two lists, to map associations in the literature.
Cell Guide: Navigate single-cell RNA-seq datasets in your web browser
·190 words·1 min
A browser-based viewer for single-cell RNA-seq datasets — explore UMAPs, gene expression, and per-cluster statistics with no installation or coding.
Quickgene.net
·88 words·1 min
A small web tool that turns a messy list of genes or SNPs into a tidy, linked table of symbols and identifiers — paste a list, get clean annotations back.
Make tidy variant tables with MyVariant.info and Tabulator
·140 words·1 min
We can use the MyVariant.info API and Tabulator to create a web page for making tidy tables with genomic variants.
Make tidy gene tables with MyGene.info and Tabulator
·139 words·1 min
Let’s use the MyGene.info API with the Tabulator JavaScript library by Oli Folkerd to create a simple web page for making tidy tables with information about genes. See how it …
Repeating pattern of colorful circles
·39 words·1 min
A groovy Javascript animation made by moving circles back and forth while each one shifts color as it goes.
Barnsley fern
·59 words·1 min
A Javascript animation that draws the Barnsley fern with the chaos game, inspired by Numberphile.
Immunogenomics.io
·106 words·1 min
Interactive data portal for the Raychaudhuri Lab — explore the primary bulk RNA-seq, single-cell RNA-seq, and mass cytometry data behind published immunogenomics studies.
Autocomplete gene names with mygene.info and typeahead.js
·128 words·1 min
We can use mygene.info with typeahead.js to autocomplete gene names and retrieve every annotation you can think of (GO, Kegg, Ensembl, position, homologs, etc.). Try typing your …