GTEx RNA-Seq Visualizations
JBrowse Genome Browser
A nucleotide’s expression level is the sum of Gencode v12 transcript RPKMs. The transcript levels were quantified by the GTEx team using Flux Capacitor. If you have RNA-Seq data, do not use Flux Capacitor. Instead, you should use RSEM or Cufflinks.
WashU Epigenome Browser
(At some point, this broke and I haven’t had time to fix it.)